BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025F01LP1|AL428410
(328 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig326 523 e-148
>3x_Contig326
Length = 1427
Score = 523 bits (261), Expect = e-148
Identities = 290/299 (96%), Gaps = 3/299 (1%)
Strand = Plus / Minus
Query: 30 gaattctataaaatgttatttgtaggattatttgatagtaattggtaatattcaaattaa 89
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1099 gaattctataaaatgttatttgtaggattatttgatagtaat-ggtaatattcaaattaa 1041
Query: 90 taatatataaatctwtwtatttacaatttagattaattattaaattaaataataataaag 149
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 taa-atataaatctaaatatttacaatttagattaattattaaattaaataataataaag 982
Query: 150 agaatattaatwtwttaaataatattaaacattatttaaaaggtaatattaatattaata 209
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 agaatattaatatattaaataatattaaacattatttaaaaggtaatattaatattaata 922
Query: 210 ataattatgtaatatgaattataaatgatataaaaaatattaataatttaattaaattat 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 ataattatgtaatatgaattataaatgatataaaaaatattaataatttaattaaattat 862
Query: 270 ttaataaatatccattaataatctataaataaaawattacaattagcatttataaaatc 328
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 861 ttaataaatatccattaataa-ctataaataaaaaattacaattagcatttataaaatc 804
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4644
Number of Sequences: 1807
Number of extensions: 4644
Number of successful extensions: 205
Number of sequences better than 1.0e-20: 1
length of query: 328
length of database: 10,358,551
effective HSP length: 15
effective length of query: 313
effective length of database: 10,331,446
effective search space: 3233742598
effective search space used: 3233742598
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 49 (98.6 bits)